Node 65
Ancestral DNA sequence:
Probabilities of bases and MPB (most probable base) at each site.
Site	A	C	G	T	MPB	Probability
1	1	0	0	0	A	1
2	0	0	0	1	T	1
3	0	0	1	0	G	1
4	1	0	0	0	A	1
5	0	0	0	0.99	T	0.99
6	0.01	0.73	0	0.26	C	0.73
7	0.91	0.01	0.08	0	A	0.91
8	0	0	0	1	T	1
9	0.07	0.2	0.12	0.61	T	0.61
10	0.01	0.19	0.01	0.79	T	0.79
11	0	0	0	1	T	1
12	0.2	0.57	0.02	0.2	C	0.57
13	0.16	0	0.84	0	G	0.84
14	1	0	0	0	A	1
15	0.03	0.28	0.02	0.67	T	0.67
16	1	0	0	0	A	1
17	0.7	0.1	0.18	0.02	A	0.7
18	0	0.94	0	0.06	C	0.94
19	0	0.03	0	0.97	T	0.97
20	0	0	0	1	T	1
21	0.97	0	0.03	0	A	0.97
22	0.01	0	0.99	0	G	0.99
23	0.79	0.15	0.04	0.02	A	0.79
24	0.42	0.17	0.29	0.13	A	0.42
25	0.01	0.04	0.96	0	G	0.96
26	1	0	0	0	A	1
27	0.31	0.01	0.67	0.01	G	0.67
28	0	0	0	1	T	1
29	0	0	0	1	T	1
30	0	0.31	0	0.69	T	0.69
31	0.08	0.88	0.01	0.02	C	0.88
32	0.99	0	0.01	0	A	0.99
33	0.11	0	0.88	0	G	0.88
34	0.05	0.74	0.05	0.16	C	0.74
35	0.33	0.09	0.43	0.14	G	0.43
36	0.07	0.43	0.13	0.37	C	0.43
37	0.27	0.02	0.67	0.03	G	0.67
38	0	0	0	1	T	1
39	0.02	0.18	0.02	0.78	T	0.78
40	0	0	0	1	T	1
41	0.99	0	0	0.01	A	0.99
42	0.01	0.26	0.01	0.73	T	0.73
43	0	1	0	0	C	1
44	0.01	0	0.99	0	G	0.99
45	0.08	0.42	0.09	0.42	T	0.42
46	0.29	0.03	0.66	0.02	G	0.66
47	0.8	0.07	0.1	0.02	A	0.8
48	0.23	0.31	0.26	0.2	C	0.31
49	0	0	1	0	G	1
50	0	0	1	0	G	1
51	0.26	0.2	0.31	0.23	G	0.31
52	0.69	0.26	0.03	0.02	A	0.69
53	0.68	0	0.32	0	A	0.68
54	0.5	0.14	0.21	0.16	A	0.5
55	1	0	0	0	A	1
56	1	0	0	0	A	1
57	0.98	0	0.02	0	A	0.98
58	0	0	0	1	T	1
59	0	0	1	0	G	1
60	0	0	1	0	G	1
61	0.01	0.98	0	0.01	C	0.98
62	1	0	0	0	A	1
63	0.07	0.04	0.86	0.03	G	0.86
64	0	1	0	0	C	1
65	0	0	1	0	G	1
66	0	0.91	0	0.08	C	0.91
67	0	0	0	1	T	1
68	0	0	1	0	G	1
69	0	0.32	0	0.68	T	0.68
70	0.7	0	0.29	0	A	0.7
71	0	0	0	1	T	1
72	0.25	0.06	0.62	0.07	G	0.62
73	0	0	1	0	G	1
74	1	0	0	0	A	1
75	0.11	0	0.88	0	G	0.88
76	0	0	1	0	G	1
77	0	1	0	0	C	1
78	0.05	0.54	0.06	0.36	C	0.54
79	1	0	0	0	A	1
80	0	0	0	1	T	1
81	0	0.79	0	0.21	C	0.79
82	0.92	0	0.08	0	A	0.92
83	1	0	0	0	A	1
84	0.07	0.44	0.07	0.42	C	0.44
85	1	0	0	0	A	1
86	1	0	0	0	A	1
87	0	0.89	0	0.1	C	0.89
88	0.72	0.21	0.05	0.03	A	0.72
89	0	0	0	1	T	1
90	0.01	0.67	0.01	0.31	C	0.67
91	0.14	0.01	0.85	0.01	G	0.85
92	0.93	0.02	0.04	0.01	A	0.93
93	0.26	0.31	0.22	0.21	C	0.31
94	0.85	0.07	0.01	0.07	A	0.85
95	0.88	0.02	0.1	0	A	0.88
96	0.01	0.46	0.01	0.53	T	0.53
97	1	0	0	0	A	1
98	0	0	0	1	T	1
99	0	0.78	0	0.21	C	0.78
100	0.63	0.2	0.14	0.03	A	0.63
101	0.97	0	0.03	0	A	0.97
102	0.24	0.04	0.67	0.05	G	0.67
103	0	0.99	0	0	C	0.99
104	0	0.99	0	0	C	0.99
105	0.14	0.32	0.17	0.36	T	0.36
106	0.01	0	0.99	0	G	0.99
107	0.79	0	0.21	0	A	0.79
108	0	0.45	0	0.54	T	0.54
109	0	0	1	0	G	1
110	0	0	0	1	T	1
111	0.23	0.13	0.43	0.21	G	0.43
112	0.6	0.01	0.31	0.08	A	0.6
113	0	0.6	0	0.4	C	0.6
114	0.06	0.29	0.21	0.44	T	0.44
115	0	0.1	0	0.9	T	0.9
116	1	0	0	0	A	1
117	0	0.19	0	0.8	T	0.8
118	0	0	0	1	T	1
119	0	1	0	0	C	1
120	0.18	0.25	0.35	0.22	G	0.35
121	0.98	0	0.02	0	A	0.98
122	0	0	0	1	T	1
123	0.04	0.37	0.04	0.55	T	0.55
124	0	0	1	0	G	1
125	0	0	1	0	G	1
126	0.03	0.54	0.03	0.4	C	0.54
127	0	0	1	0	G	1
128	1	0	0	0	A	1
129	0	0.01	0	0.99	T	0.99
130	0	0	0	1	T	1
131	0	1	0	0	C	1
132	0.37	0.09	0.43	0.11	G	0.43
133	0	1	0	0	C	1
134	0	0	0	1	T	1
135	0	0	1	0	G	1
136	0.09	0	0.91	0	G	0.91
137	0	0.06	0	0.94	T	0.94
138	0.08	0.32	0.07	0.53	T	0.53
139	0	0	0	1	T	1
140	1	0	0	0	A	1
141	0	0.21	0	0.78	T	0.78
142	0	1	0	0	C	1
143	0	0	1	0	G	1
144	0.01	0.93	0.03	0.04	C	0.93
145	0.08	0.6	0.24	0.07	C	0.6
146	0	0	0	1	T	1
147	0.08	0.17	0.23	0.52	T	0.52
148	0.02	0.01	0.97	0	G	0.97
149	0.83	0.1	0.05	0.02	A	0.83
150	0.41	0.09	0.42	0.08	G	0.42
151	0.45	0	0.54	0.01	G	0.54
152	0.42	0.48	0.04	0.06	C	0.48
153	0.09	0.42	0.08	0.4	C	0.42
154	0.01	0	0.99	0	G	0.99
155	0.12	0	0.88	0	G	0.88
156	0.06	0.5	0.05	0.39	C	0.5
157	0.45	0.13	0.3	0.12	A	0.45
158	0.02	0.86	0.02	0.1	C	0.86
159	0.21	0.35	0.15	0.3	C	0.35
160	0.25	0	0.74	0	G	0.74
161	0.15	0.42	0.36	0.08	C	0.42
162	0.27	0.3	0.25	0.19	C	0.3
163	0.24	0.37	0.2	0.18	C	0.37
164	0.89	0.02	0.07	0.02	A	0.89
165	0.39	0.1	0.43	0.08	G	0.43
166	0.09	0.76	0.05	0.1	C	0.76
167	0.1	0.83	0.02	0.04	C	0.83
168	0.3	0.17	0.41	0.12	G	0.41
169	0.23	0.11	0.66	0.01	G	0.66
170	0.84	0.06	0.08	0.03	A	0.84
171	0.12	0.4	0.13	0.35	C	0.4
172	0.01	0.01	0.98	0	G	0.98
173	0.19	0.64	0.13	0.05	C	0.64
174	0.38	0.1	0.44	0.08	G	0.44
175	0.02	0.56	0.03	0.39	C	0.56
176	0.06	0.02	0.1	0.82	T	0.82
177	0.2	0.02	0.76	0.03	G	0.76
178	0	0	0	1	T	1
179	0	0	0	1	T	1
180	0.02	0.39	0.03	0.56	T	0.56
181	0.01	0	0.98	0	G	0.98
182	0.81	0.02	0.03	0.14	A	0.81
183	0.29	0.22	0.41	0.08	G	0.41
184	0	0	1	0	G	1
185	0	0	1	0	G	1
186	0.1	0.45	0.12	0.34	C	0.45
187	0.97	0.01	0.01	0	A	0.97
188	1	0	0	0	A	1
189	0.04	0.61	0.03	0.33	C	0.61
190	0	1	0	0	C	1
191	0	0	1	0	G	1
192	0.01	0.81	0.01	0.17	C	0.81
193	0	1	0	0	C	1
194	0	0	1	0	G	1
195	0.01	0.42	0.01	0.55	T	0.55
196	0	0	0	1	T	1
197	1	0	0	0	A	1
198	0	0.37	0	0.62	T	0.62
199	0	0	0	1	T	1
200	0	0	0	1	T	1
201	0	0.33	0	0.67	T	0.67
202	0	0	0.99	0	G	0.99
203	1	0	0	0	A	1
204	0.09	0.19	0.14	0.58	T	0.58
205	0	0	1	0	G	1
206	0	0	0	1	T	1
207	0.01	0	0.99	0	G	0.99
208	0	1	0	0	C	1
209	1	0	0	0	A	1
210	0	0.13	0	0.87	T	0.87
211	0	0	0	1	T	1
212	1	0	0	0	A	1
213	0	0.8	0	0.19	C	0.8
214	0	0	0	1	T	1
215	0.99	0	0.01	0	A	0.99
216	0	0.97	0	0.02	C	0.97
217	0	1	0	0	C	1
218	0	0	0	1	T	1
219	0.23	0.17	0.35	0.24	G	0.35
220	0	0	1	0	G	1
221	0.94	0.03	0.02	0.01	A	0.94
222	0.35	0.19	0.42	0.04	G	0.42
223	0	0	1	0	G	1
224	0	0	1	0	G	1
225	0.39	0.1	0.4	0.11	G	0.4
226	0.04	0.79	0.06	0.11	C	0.79
227	0.99	0	0.01	0	A	0.99
228	0.27	0.06	0.61	0.06	G	0.61
229	0	0	1	0	G	1
230	1	0	0	0	A	1
231	0.78	0	0.21	0	A	0.78
232	0.98	0.01	0.01	0	A	0.98
233	0.04	0.89	0.03	0.04	C	0.89
234	0.26	0.21	0.32	0.21	G	0.32
235	0.35	0	0.65	0	G	0.65
236	0	0	0	1	T	1
237	0.07	0.31	0.08	0.54	T	0.54
238	0	0	1	0	G	1
239	1	0	0	0	A	1
240	0.1	0	0.89	0	G	0.89
241	0.04	0.05	0.14	0.76	T	0.76
242	0.01	0.01	0	0.97	T	0.97
243	0.03	0.29	0.03	0.65	T	0.65
244	0	0	1	0	G	1
245	0	1	0	0	C	1
246	0.15	0.38	0.19	0.28	C	0.38
247	0.14	0.01	0.83	0.01	G	0.83
248	0.54	0.26	0.14	0.06	A	0.54
249	0.03	0.49	0.03	0.45	C	0.49
250	1	0	0	0	A	1
251	1	0	0	0	A	1
252	1	0	0	0	A	1
253	0.44	0.09	0.34	0.12	A	0.44
254	0.27	0.25	0.36	0.12	G	0.36
255	0.06	0.61	0.07	0.27	C	0.61
256	0.18	0.03	0.77	0.02	G	0.77
257	0.3	0.36	0.13	0.21	C	0.36
258	0.26	0.14	0.48	0.13	G	0.48
259	0	0.91	0	0.09	C	0.91
260	0	0	0	1	T	1
261	0.28	0.02	0.67	0.02	G	0.67
262	0.97	0	0.03	0	A	0.97
263	0.17	0.49	0.13	0.21	C	0.49
264	0.22	0.23	0.3	0.25	G	0.3
265	0.07	0.61	0.07	0.24	C	0.61
266	0	0.8	0	0.19	C	0.8
267	0.41	0.07	0.45	0.07	G	0.45
268	0	0	1	0	G	1
269	0.15	0.01	0	0.84	T	0.84
270	0.31	0.03	0.63	0.03	G	0.63
271	0.29	0.04	0.65	0.02	G	0.65
272	0.84	0.02	0.06	0.08	A	0.84
273	0.3	0.09	0.49	0.11	G	0.49
274	0.03	0.02	0.94	0.02	G	0.94
275	0.01	0.96	0.01	0.02	C	0.96
276	0.03	0.44	0.03	0.5	T	0.5
277	0	0	0	1	T	1
278	1	0	0	0	A	1
279	0	0.2	0	0.79	T	0.79
280	0.03	0.95	0.01	0.01	C	0.95
281	0.05	0	0.95	0	G	0.95
282	0.08	0.6	0.1	0.22	C	0.6
283	0	0	1	0	G	1
284	1	0	0	0	A	1
285	0	0.04	0	0.96	T	0.96
286	0	0	1	0	G	1
287	1	0	0	0	A	1
288	0.99	0	0.01	0	A	0.99
289	1	0	0	0	A	1
290	0	1	0	0	C	1
291	0.02	0.54	0.02	0.42	C	0.54
292	0	0	1	0	G	1
293	1	0	0	0	A	1
294	0	0.87	0	0.13	C	0.87
295	0	1	0	0	C	1
296	0	0	1	0	G	1
297	0.09	0.47	0.1	0.34	C	0.47
298	0	0	1	0	G	1
299	1	0	0	0	A	1
300	0.43	0	0.57	0	G	0.57
301	0	0	0	1	T	1
302	0.01	0.02	0	0.97	T	0.97
303	0.02	0.27	0.02	0.69	T	0.69
304	0	0.49	0	0.51	T	0.51
305	0	0	0	1	T	1
306	0.08	0.5	0.25	0.17	C	0.5
307	0.89	0.02	0.06	0.02	A	0.89
308	0.14	0.07	0.77	0.01	G	0.77
309	0.07	0.46	0.06	0.42	C	0.46
310	0	0	1	0	G	1
311	0	0	1	0	G	1
312	0.12	0.36	0.17	0.35	C	0.36
313	0.15	0.49	0.11	0.24	C	0.49
314	0.95	0	0.04	0	A	0.95
315	0.41	0.1	0.42	0.08	G	0.42
316	0	0	0	0	-	0
317	0	0	0	0	-	0
318	0	0	0	0	-	0
319	0	0	1	0	G	1
320	0	0	1	0	G	1
321	0.05	0.32	0.05	0.57	T	0.57
322	0	0	0.99	0	G	0.99
323	1	0	0	0	A	1
324	0.45	0.01	0.54	0.01	G	0.54
325	0.98	0	0.02	0	A	0.98
326	0.03	0.87	0.04	0.06	C	0.87
327	0.23	0.32	0.2	0.25	C	0.32
328	0	0.98	0	0.01	C	0.98
329	0.61	0.03	0.18	0.18	A	0.61
330	0.11	0.21	0.19	0.49	T	0.49
331	0.02	0.86	0.03	0.08	C	0.86
332	0.88	0.01	0.09	0.02	A	0.88
333	0.23	0.19	0.46	0.11	G	0.46
334	0.06	0.27	0.54	0.13	G	0.54
335	0	0	0	1	T	1
336	0.18	0.33	0.2	0.29	C	0.33
337	0.43	0.14	0.32	0.1	A	0.43
338	0.75	0.01	0.22	0.01	A	0.75
339	0.22	0.3	0.29	0.18	C	0.3
340	0.06	0.06	0.87	0.01	G	0.87
341	0.85	0.13	0.01	0.01	A	0.85
342	0.79	0.03	0.15	0.02	A	0.79
343	0	0	1	0	G	1
344	0	0	1	0	G	1
345	0.09	0.55	0.1	0.26	C	0.55
346	0.95	0.03	0.02	0	A	0.95
347	1	0	0	0	A	1
348	0.16	0.44	0.2	0.2	C	0.44
349	0.05	0	0.95	0	G	0.95
350	0	0	0	1	T	1
351	0.14	0.15	0.63	0.08	G	0.63
352	0.01	0.01	0.98	0	G	0.98
353	0	0.02	0	0.98	T	0.98
354	0.25	0.16	0.4	0.19	G	0.4
355	0.99	0	0.01	0	A	0.99
356	0	0	0	1	T	1
357	0.01	0.31	0.01	0.68	T	0.68
358	0	0	0	1	T	1
359	0	0	0.01	0.99	T	0.99
360	0	0.38	0	0.62	T	0.62
361	0	0	1	0	G	1
362	1	0	0	0	A	1
363	0.42	0.17	0.22	0.2	A	0.42
364	1	0	0	0	A	1
365	1	0	0	0	A	1
366	0	0.96	0	0.04	C	0.96
367	0.12	0.56	0.16	0.16	C	0.56
368	1	0	0	0	A	1
369	0.01	0.68	0.01	0.31	C	0.68
370	0.02	0.03	0.95	0	G	0.95
371	1	0	0	0	A	1
372	0.32	0	0.68	0	G	0.68
373	0	0	1	0	G	1
374	0	1	0	0	C	1
375	0.26	0.26	0.25	0.24	C	0.26
376	0	0.09	0	0.91	T	0.91
377	1	0	0	0	A	1
378	0	0.99	0	0.01	C	0.99
379	0	1	0	0	C	1
380	0	0	1	0	G	1
381	0.25	0.32	0.23	0.2	C	0.32
382	0	0	0	1	T	1
383	0	0	0	1	T	1
384	0	0.27	0	0.72	T	0.72
385	0.7	0.07	0.18	0.06	A	0.7
386	0.12	0.45	0.07	0.36	C	0.45
387	0.06	0.8	0.06	0.09	C	0.8
388	0.04	0.11	0.66	0.19	G	0.66
389	0.11	0	0.89	0	G	0.89
390	0.18	0.33	0.14	0.35	T	0.35
391	0.14	0.01	0.84	0.01	G	0.84
392	0.57	0.05	0.37	0.01	A	0.57
393	0.08	0.39	0.09	0.44	T	0.44
394	0.5	0.02	0.46	0.02	A	0.5
395	0.94	0	0.05	0	A	0.94
396	0	0.97	0	0.02	C	0.97
397	0.08	0.48	0.4	0.03	C	0.48
398	0.67	0.08	0.24	0.02	A	0.67
399	0.3	0.18	0.38	0.15	G	0.38
400	0	0	1	0	G	1
401	0	0	0	1	T	1
402	0.5	0.07	0.37	0.06	A	0.5
403	0	0	0	0	-	0
404	0	0	0	0	-	0
405	0	0	0	0	-	0
406	0	0	0	0	-	0
407	0	0	0	0	-	0
408	0	0	0	0	-	0
409	0.94	0.02	0.03	0.01	A	0.94
410	0.34	0	0.66	0	G	0.66
411	0.64	0.05	0.27	0.04	A	0.64
412	1	0	0	0	A	1
413	1	0	0	0	A	1
414	0.96	0	0.04	0	A	0.96
415	0	0	1	0	G	1
416	0	0	0	1	T	1
417	0.08	0.36	0.47	0.09	G	0.47
418	0.17	0	0.83	0	G	0.83
419	0	0	0	1	T	1
420	0.1	0.06	0.75	0.09	G	0.75
421	0	0.97	0	0.03	C	0.97
422	0	0	0	1	T	1
423	0.16	0.53	0.07	0.24	C	0.53
424	1	0	0	0	A	1
425	0.99	0	0.01	0	A	0.99
426	0.92	0.02	0.05	0.01	A	0.92
427	0	0	1	0	G	1
428	0	0	0	1	T	1
429	0.22	0.18	0.47	0.13	G	0.47
430	1	0	0	0	A	1
431	0	1	0	0	C	1
432	0.01	0.8	0.01	0.17	C	0.8
433	0.75	0	0.25	0	A	0.75
434	0	0	0	1	T	1
435	0.04	0.42	0.04	0.5	T	0.5
436	0	0	1	0	G	1
437	1	0	0	0	A	1
438	0.97	0	0.03	0	A	0.97
439	0	0	1	0	G	1
440	1	0	0	0	A	1
441	0.02	0.56	0.01	0.41	C	0.56
442	0.1	0	0.9	0	G	0.9
443	0	0	1	0	G	1
444	0.01	0.63	0.02	0.34	C	0.63
445	0	0	0	1	T	1
446	1	0	0	0	A	1
447	0	0.07	0	0.92	T	0.92
448	0	0	0	1	T	1
449	0	0	0	1	T	1
450	0	0.99	0	0.01	C	0.99
451	0	0.97	0	0.03	C	0.97
452	0	0	0	1	T	1
453	0.29	0.17	0.26	0.28	A	0.29
454	1	0	0	0	A	1
455	1	0	0	0	A	1
456	0	0.61	0	0.38	C	0.61
457	1	0	0	0	A	1
458	1	0	0	0	A	1
459	1	0	0	0	A	1
460	0	0	0	1	T	1
461	1	0	0	0	A	1
462	0.96	0	0.04	0	A	0.96


The most probable ancestral DNA sequence is:
ATGATCATTTTCGATAACTTAGAAGAGTTTCAGCGCGTTTATCGTGACGGGAAAAAATGGCAGCGCTGTATGGAGGCCATCAACAACATCGACAATATCAAGCCTGATGTGACTTATTCGATTGGCGATTCGCTGGTTTATCGCCTTGAGGCCGGCACCGCCCAGCCGGACGCGCTGTTTGAGGGCAACCGCCGTTATTTTGATGTGCATTACTACCTGGAGGGGCAGGAAACGGTTGAGTTTGCCGACAAAAGCGCGCTGACGCCGGTGGAGGCTTATCGCGATGAAACCGACCGCGAGTTTTTCAGCGGCCAG---GGTGAGACCCATCAGGTCAACGAAGGCAACGTGGTGATTTTTGAAAACCACGAGGCCTACCGCTTTACCGGTGATAACCAGGTA------AGAAAAGTGGTGCTCAAAGTGACCATTGAAGACGGCTATTTCCTAAACAAATAA

The most probable DNA sequence without gaps is:
ATGATCATTTTCGATAACTTAGAAGAGTTTCAGCGCGTTTATCGTGACGGGAAAAAATGGCAGCGCTGTATGGAGGCCATCAACAACATCGACAATATCAAGCCTGATGTGACTTATTCGATTGGCGATTCGCTGGTTTATCGCCTTGAGGCCGGCACCGCCCAGCCGGACGCGCTGTTTGAGGGCAACCGCCGTTATTTTGATGTGCATTACTACCTGGAGGGGCAGGAAACGGTTGAGTTTGCCGACAAAAGCGCGCTGACGCCGGTGGAGGCTTATCGCGATGAAACCGACCGCGAGTTTTTCAGCGGCCAGGGTGAGACCCATCAGGTCAACGAAGGCAACGTGGTGATTTTTGAAAACCACGAGGCCTACCGCTTTACCGGTGATAACCAGGTAAGAAAAGTGGTGCTCAAAGTGACCATTGAAGACGGCTATTTCCTAAACAAATAA

The accuracy score for that sequence is 0.812803532008831

The accuracy score is defined as the average probability of
the most probable bases.  It is NOT the probability that the
most probable sequence is correct.  That probability is 3.19534060298667e-51.
The natural log of that probability is -116.270146055545.

Ancestral Protein Sequence:
Column headings:
MPAA = most probable amino acid, pMPAA = probability of MPAA
MPAA2 = second most probable amino acid, pMPAA2 = probability of MPAA2
Ratio = pMPAA/pMPAA2,  Unreliable means Ratio <1.5

MPAA	pMPAA	MPAA2	pMPAA2	Ratio
M	1	A	0	9999	
I	0.99	A	0	9999	
I	0.8008	M	0.1092	7.33333333333333	
F	0.6083	L	0.3619	1.68085106382979	
D	0.798	N	0.152	5.25	
N	0.7	S	0.18	3.88888888888889	
L	1	A	0	9999	
E	0.555291	D	0.23463	2.36666666666667	
E	0.9408	Q	0.0392	24	
F	1	A	0	9999	
Q	0.862488	K	0.078408	11	
R	0.3225	H	0.19536	1.65079852579853	
V	0.67	I	0.2646	2.53212396069539	
Y	0.9801	X	0.0198	49.5	
R	0.9999	H	0.0084	119.035714285714	
D	0.26928	E	0.25872	1.04081632653061	Unreliable
G	1	A	0	9999	
K	0.333132	R	0.2408	1.38343853820598	Unreliable
K	1	A	0	9999	
W	1	A	0	9999	
Q	0.9114	H	0.0686	13.2857142857143	
R	0.99	A	0	9999	
C	1	A	0	9999	
M	0.434	V	0.29	1.49655172413793	Unreliable
E	0.99	A	0	9999	
A	1.01	R	0	9999	
I	1	A	0	9999	
N	0.7912	K	0.1288	6.14285714285714	
N	0.99	A	0	9999	
I	0.7128	L	0.2106	3.38461538461539	
D	0.41106	E	0.37944	1.08333333333333	Unreliable
N	0.74052	S	0.085564	8.65457435370016	
I	0.99	A	0	9999	
K	0.556101	Q	0.17654	3.15	
P	0.970299	A	0	9999	
D	0.774279	G	0.205821	3.76190476190476	
V	1	A	0	9999	
T	0.36	I	0.1896	1.89873417721519	
Y	0.891	H	0.099	9	
S	1	A	0	9999	
I	0.9408	M	0.0392	24	
G	1	A	0	9999	
D	1	A	0	9999	
S	1	A	0	9999	
L	1	A	0	9999	
V	0.8554	I	0.078678	10.8721624850657	
Y	0.99	A	0	9999	
R	1.01	A	0	9999	
L	0.6217	V	0.24	2.59041666666667	
E	0.668233	D	0.136867	4.88235294117647	
A	0.256608	T	0.21384	1.2	Unreliable
G	0.8712	D	0.105732	8.23970037453184	
T	0.39087	A	0.26058	1.5	Unreliable
A	0.313908	G	0.269064	1.16666666666667	Unreliable
Q	0.270026	K	0.175152	1.54166666666667	
P	0.6308	S	0.083522	7.55250113742487	
D	0.4158	N	0.1449	2.8695652173913	
A	0.6272	E	0.152684	4.10783055198973	
L	0.7708	R	0.05848	13.1805745554036	
F	0.95	L	0.05	19	
E	0.55566	D	0.23814	2.33333333333333	
G	1.01	A	0	9999	
N	0.9118	K	0.0679	13.4285714285714	
R	1	A	0	9999	
R	0.99	A	0	9999	
Y	0.99	A	0	9999	
F	1	A	0	9999	
D	0.7623	E	0.2277	3.34782608695652	
V	1	A	0	9999	
H	1	A	0	9999	
Y	0.99	A	0	9999	
Y	0.9801	C	0.0099	99	
L	0.99	A	0	9999	
E	0.7238	D	0.2162	3.34782608695652	
G	1	A	0	9999	
Q	0.688248	X	0.096129	7.15962924819773	
E	0.99	A	0	9999	
T	0.8722	I	0.026656	32.7205882352941	
V	0.65	I	0.322	2.01863354037267	
E	0.99	A	0	9999	
F	0.692968	V	0.1358	5.10285714285714	
A	1	R	0	9999	
D	0.421308	A	0.2158	1.95230769230769	
K	1	A	0	9999	
S	0.169692	G	0.123624	1.37264608813823	Unreliable
A	0.279972	E	0.17094	1.63783783783784	
L	0.9864	F	0.0036	274	
T	0.4753	I	0.14259	3.33333333333333	
P	0.488	S	0.192	2.54166666666667	
V	0.84	E	0.141	5.95744680851064	
E	0.43134	K	0.192444	2.24137931034483	
A	0.9024	T	0.0288	31.3333333333333	
Y	0.99	A	0	9999	
R	0.90763	H	0.03895	23.3024390243902	
D	1	A	0	9999	
E	1	A	0	9999	
T	1	A	0	9999	
D	1	A	0	9999	
R	1	A	0	9999	
E	1	A	0	9999	
F	0.9312	L	0.0388	24	
L	0.6583	F	0.3417	1.92654375182909	
S	0.604478	N	0.109648	5.51289581205311	
G	1	A	0	9999	
Q	0.386365	X	0.193176	2.00006729614445	
	0	-	0	0
G	0.99	A	0	9999	
E	0.9801	D	0.0198	49.5	
T	0.8526	I	0.04704	18.125	
H	0.41846	Q	0.17934	2.33333333333333	
Q	0.522192	H	0.22704	2.3	
V	0.54	L	0.3194	1.69067000626174	
K	0.164475	N	0.1548	1.0625	Unreliable
E	0.69513	A	0.111969	6.20823620823621	
G	1	A	0	9999	
N	0.608	K	0.342	1.77777777777778	
V	0.95	M	0.0315	30.1587301587302	
V	0.9604	A	0.0196	49	
I	0.99	V	0.0101	98.019801980198	
F	0.99	C	0.01	99	
E	0.64	D	0.37	1.72972972972973	
N	1	A	0	9999	
H	0.5544	D	0.1584	3.5	
E	0.95	Q	0.03	31.6666666666667	
A	1.01	R	0	9999	
Y	0.91	H	0.09	10.1111111111111	
R	1	A	0	9999	
F	0.99	A	0	9999	
T	0.31815	I	0.2394	1.32894736842105	Unreliable
G	0.5874	C	0.114988	5.10835913312694	
D	0.397404	G	0.3108	1.27864864864865	Unreliable
N	0.4653	D	0.428076	1.08695652173913	Unreliable
Q	0.218688	E	0.18224	1.2	Unreliable
V	1	A	0	9999	
	0	-	0	0
	0	-	0	0
R	0.577764	K	0.290836	1.98656287392207	
K	1	A	0	9999	
V	1	A	0	9999	
V	0.83	M	0.1275	6.50980392156863	
L	0.9769	F	0.0231	42.2900432900433	
K	0.9603	N	0.0297	32.3333333333333	
V	1	A	0	9999	
T	0.99	A	0	9999	
I	0.72	V	0.25	2.88	
E	1	A	0	9999	
D	0.97	E	0.03	32.3333333333333	
G	0.9	S	0.097	9.27835051546392	
Y	0.99	A	0	9999	
F	1	A	0	9999	
L	0.9865	F	0.0135	73.0740740740741	
N	0.99	A	0	9999	
K	1	A	0	9999	
X	1	A	0	9999	


The most probable ancestral protein sequence is:
MIIFDNLEEFQRVYRDGKKWQRCMEAINNIDNIKPDVTYSIGDSLVYRLEAGTAQPDALFEGNRRYFDVHYYLEGQETVEFADKSALTPVEAYRDETDREFLSGQ-GETHQVKEGNVVIFENHEAYRFTGDNQV--RKVVLKVTIEDGYFLNKX

The most probable ancestral protein sequence without gaps is:
MIIFDNLEEFQRVYRDGKKWQRCMEAINNIDNIKPDVTYSIGDSLVYRLEAGTAQPDALFEGNRRYFDVHYYLEGQETVEFADKSALTPVEAYRDETDREFLSGQGETHQVKEGNVVIFENHEAYRFTGDNQVRKVVLKVTIEDGYFLNKX

The accuracy score for that sequence is 0.806557741721854

The accuracy score is defined as the average probability of
the most probable amino acids.  It is NOT the probability that the
most probable sequence is correct.  That probability is 3.13624732776661e-19
The natural log of that probability is -42.606089800236.

